Building Self-Evolving Knowledge Graphs Using Agentic Systems

Navigating the impact of graph databases and how AI agents address the limitations of static graphs with continuous knowledge base expansion and enrichment.
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11 min

https://www.moderndata101.com/blogs/building-self-evolving-knowledge-graphs-using-agentic-systems/

Originally published on 

Modern Data 101 Newsletter

, the following is a revised edition.

Data leaders today are walking a tightrope. On one hand, there is pressure to modernise, innovate, and keep up with what’s next. Consider how technology is moving faster than we ever anticipated. The way of working just back in early 2024 is vastly different from how we do things now: from code & business to day-to-day browsing. And the transition will not slow down, much less the technology.

On the other hand, there are bottlenecks of legacy systems, fragmented platforms, and teams racing to match the old systems and processes with the new world.

The demand curve is getting steeper: Faster insights, deeper interconnectivity, and decisions that can’t wait. The margin for delay is shrinking. The expectation for clarity is high. However, in the case of data, it isn’t a ‘more, the merrier’ situation. In fact, the more, the messier (often)!

The Pivot We Needed to Match the Beat

Traditional databases are like predefined maps, while graph databases are living networks that grow and adapt with your data and questions. Consequently, the need for a more flexible and comprehensive data model is becoming increasingly urgent in today's dynamic data landscape.

Enter Graph Databases!

What are Graph Databases

Graph databases refer to a collection or database that stores and leverages data as nodes, edges, relationships & properties instead of the traditional tabular or document format.

Owing to its integral feature of managing relationships within data, they can single-handedly address the challenges of data abstraction and capturing multidimensional data relationships.

The simple way you can think of a graph database is as an e-commerce platform where products, customers, and reviews are all individual nodes. Each relationship is stored as a direct connection, like a customer purchasing a product, reviewing it, or products often bought together.

Elements of a graph database
Elements in Graph Databases | Source: Authors

So this means you can easily answer queries like, 'which products do customers who bought X tend to by next?.' This can be done without relying on complex join operations across multiple tables. This direct representation of relationships makes it simpler to detect the purchasing patterns and improve recommendations to deliver a more personalised shopping experience.


Why Graph Databases Are Trending Today: Creating Lasting Impact on Unsolved Terrain

Data personas like architects, designers or engineers across industry verticals face challenges regarding traditional relational databases when searching for the data that fits right and serves the objectives.

Imagine reading a document containing multiple data points about individuals: height, weight, and occupation. For a use case like tracking body metrics, you create a table that only stores height and weight, ignoring other data like occupation because they aren’t needed.

In a relational database, this abstraction is rigid and predefined. The schema only supports height and weight columns; occupation is lost in the process. If, later on, you want to analyse how someone’s occupation correlates with their health, the relational database has no way to provide that context.

You'd have to return to the original document, extract the data, and potentially rework the schema to accommodate this new relationship. Here, we’ll boil down the problems into two broader categories.

The Problem of Data Abstraction

Traditional relational databases force you to fit data into predefined tables. What happens here is,

you discard valuable context and relationships that don't fit the initial schema.

These DBs often require a fixed schema, making it hard to adapt when new data relationships emerge. The problem? Updating schemas is time-consuming and error-prone.

The Problem of Capturing Complex, Multi-dimensional Relationships

Relational databases are inefficient when handling data with many-to-many relationships or complex, interconnected entities (e.g., social networks, recommendation systems, supply chain relationships).

Queries become slow and complex, making it challenging to discover hidden connections.

Moreover, traditional relational databases focus on structured queries for predefined use cases but are bad at discovering relationships across large datasets (e.g., finding connections between seemingly unrelated data).

What category did we miss


How Do Graph Databases Work

The three fundamental elements driving graph databases are ‘nodes’, ‘edges’ & ‘properties’.

  • Nodes are the entities or objects.
  • Edges refer to relations or connections between the nodes.
  • Properties are the key-value pairs that store the attributes of the nodes or edges.

Treating relationships as first-class citizens.

But how? These graph DBs go beyond relational databases by capturing complex, multi-dimensional relationships between data points.

Unlike traditional approaches, graph databases preserve contextual and related information, even when it's not immediately relevant to a use case.

In graph databases, relationships are treated as first-class citizens, meaning they are fundamental components of the data model, in par with the data entities (nodes) themselves.

Explicit storage.

In a graph database, relationships are stored directly as dedicated objects with their own attributes (properties), types (labels), and directional information. Unlike relational databases, which rely on foreign keys and join operations to infer relationships at query time, graph databases physically store these connections, enabling rapid, index-free traversal.

Rich data modelling.

Relationships carry metadata such as timestamps, weights, or other contextual information, making them as dynamic and flexible as the nodes they connect. These relationships are, hence, more than simple links and allow complex, multi-dimensional interactions (like those in supply chain networks or social media) to be modelled naturally and evolve over time without restructuring the entire schema.

Optimised performance through data connections.

Because relationships are integral to the graph’s structure, traversing them doesn’t require expensive join operations. The “index-free adjacency” principle means each node directly points to its connected neighbours, ensuring that even deep, recursive queries perform efficiently.

Improved discoverability and exploration.

Traditional data structures discard data that doesn’t fit the immediate need, but graph databases allow for more flexibility and discovery-driven analytics. They offer the potential to explore hidden relationships without predefining all the questions in advance. This approach enables deeper insights and unlocks new use cases in analytics and discovery.


Establishing Graphs as Self-Evolving Knowledge Systems with Better Reasoning

While graphs have their overarching benefits, we should not let them be limited to static and manual update capabilities. What organisations require the most is to enrich the knowledge base of the graph for improved reasoning and answering capabilities.

Just like the human brain doesn’t learn everything instantly, it builds knowledge layer by layer, refining it over time. Graphs can be positioned in the industry in a way that serves as evolving systems, similar to human cognitive processes.

Traditional knowledge graphs do not evolve dynamically; they are usually manually updated or fixed in structure.

So the real power comes when graphs are continuously enriched, and this is where AI agents play a crucial role in mimicking, similar to how the human brain forms connections over time.

AI agents can dynamically update and refine graphs over time, making them more intelligent & valuable. In the following section, let us dive into how AI agents make these graphs better!

The changing impact of graphs on business users with AI Agents | Source: Authors

AI Agents as the Key to Incremental Knowledge Enrichment

Speaking technically, AI agents should not just query graphs but actively enrich and update them. These should self-improve, leading to better insights for applications.

For example, if a new relationship emerges, the agent should automatically add it to the graph, rather than relying on human updates.

What do we expect from AI Agents?

For the AI-driven graph representation to grow over time,

  • Every time the system revisits a subject, it should add depth by making more connections between previously unlinked concepts.
  • This leads to a self-reinforcing knowledge structure where ideas do not remain isolated but integrate into a broader, interconnected web of understanding.

Depth = Better Intelligence & More Accurate Responses.

As data volumes increase, researchers and tech developers are constantly trying to turn these knowledge systems into evolving and intelligent systems with the help of AI agents.


Leveraging recursive and autonomous expansion techniques

Think of it like a detective following leads: not just reacting once, but going deeper with every new clue, forming connections that weren’t obvious at first. That's recursive exploration, and doing it autonomously means it happens without human micromanagement.

Recursive and autonomous expansion refers to the idea that a graph doesn't grow just by adding facts once, instead, it evolves over time, often by:

  • Making multi-step decisions to explore relationships.
  • Finding new links between existing concepts.
  • Updating itself as new data is discovered.

So, the vision here is to build Agentic systems that don’t just consume a graph but constantly improve the knowledge base. One of the most valuable techniques here is to leverage the capabilities of multi-hop reasoning & reinforcement learning.

A knowledge graph alone is like a database of connections, but an AI agent can perform reasoning on top of it to generate insights. The AI agent doesn’t just retrieve information, it reasons over multiple steps to draw conclusions. Multi-hop queries allow the AI agent to follow logical paths across the graph and synthesise insights.

Traditional knowledge graphs rely on one-shot predictions (i.e., predicting relationships in a single step). However, RL-based frameworks allow agents to make multi-hop queries or sequential decisions to discover new knowledge.


Multi-Modal Understanding

Information doesn’t reside solely in structured text or databases; it’s found in images, videos, audio, and more. To fully enrich a knowledge graph, agents must be able to interpret and integrate knowledge from multiple modalities.

This needs the ability to align semantic representations across different data types, reason visual or auditory elements, and connect them meaningfully with textual information. The result is a richer, more holistic graph that reflects a broader understanding of the world.

GenAI and Multimodal Agents’ Capabilites | Source

Time-Aware Graph Reasoning

Knowledge is not frozen in time. When we relearn something, we build on previous knowledge and refine our understanding. Our brain follows a learning cycle, and similarly, the graphs should update. Relationships change, contexts shift, and new entities emerge.

To reflect this, agents must reason over temporally evolving data. Users now know not only the existing fact but also when it turned true and how the truth value has changed over time. Temporal reasoning becomes critical in allowing agents to reflect the chronological consistency into the knowledge graph, ensuring that inferences align with the progression of real-world events.

AI agents constantly "relearn" the graph by either

  1. adding new relationships when new data appears,
  2. removing outdated or weak connections over time, or
  3. Strengthening connections that are frequently referenced.

This incremental improvement process leads to more accurate insights over time.


🔍 Extracting and Learning from Raw Text

A big breakthrough happened when systems learned to read text and find relationships on their own. They’d start with a few known examples, then look for similar patterns in large amounts of text to discover more facts. Some could even suggest new facts and check them against online information to see if they made sense.

Later, more advanced systems were built that could scan huge volumes of unstructured text and extract simple, sentence-like facts. For example, "water boils at 100°C." These didn’t rely on predefined templates, making them flexible and scalable.

💡 The challenge? These extracted facts still needed to be cleaned up and organised before they could fully integrate into a meaningful graph.

This is where the agent's role becomes more sophisticated. It doesn’t just extract, it normalises, resolves co-references, deduplicates entities, aligns with existing graph ontologies, and even decides which facts are worth integrating.

Here, reasoning plays a central role. The agent asks:

  • Does this fact conflict with something I already know?
  • Can I validate it using other textual sources or even other modalities (e.g., images or structured tables)?
  • What confidence do I have in this relationship, and is it useful?

Only then does the fact earn its place in the graph.


So What About the Existing Tables? Do They Add Value?

Structured Data Could be the Starting Point for Graph Intelligence…

Modern organisations in the data space already manage structured data at scale: clean tables, governed datasets, dimensional models, and domain-specific data products. these are high-value assets and not mere datasets with siloes.

Structured Data → Connected Knowledge

Self-evolving knowledge graphs need two primary things:

  1. Reliable, interpretable entities and relationships
  2. A mechanism to keep those relationships current as new data flows in

Your structured data already captures:

  • Entities are your rows (for instance, customers, orders, assets)
  • Attributes are your columns (statuses, timestamps, metrics)
  • Relationships are embedded in joins, foreign keys, or modelled dimensions

You’ve modelled entities, defined schemas, and governed access. You’ve made the data queryable and composable.

Moreover, taking purpose-driven data products makes your data assets business-ready, where these are modelled around real-world concepts that answer the precise business questions.

These are consistent, i.e., governed, versioned, and contract-driven.

Now, by layering a graph on top, you create a knowledge infrastructure that can drive:

Cross-Domain Linking Without Data Movement
Instead of new pipelines, the graph can link across your existing data products. For instance, a finance model and a support model don’t need to be merged; they just need to be connected through graph logic. You preserve your modularity but gain holistic intelligence.

Minimal ETL loads
You don’t need to move or duplicate data. Just a layer that maps structure into connections.

At a glance, feeding structured data into a graph, you unlock:

  • Semantic richness (understanding how things relate),
  • Cross-domain reasoning (connecting sales to support to logistics),
  • And adaptability (evolving structure as new needs arise).

Navigating the Art of the Possible

In the agentic workflows, as we walked through earlier, you get a living, connected view of your data products; one that becomes smarter without re-engineering anything.

An AI agent can reliably detect new links, changes, and missing connections over time. As your data products update, the graph self-evolves: learning, expanding, and reflecting real-world complexity.


The Business Impact: Why Enriching Graphs Matters?

As businesses increasingly turn to AI to power their applications, there's a growing recognition that data alone isn’t enough. It’s how that data is structured, connected, and continuously enriched that determines the quality of insights and decisions. This is where AI-updated knowledge graphs provide a significant edge.

1. Smarter AI models Driven by Dynamic Knowledge Graphs

Let’s be honest. Graph technology sounds complex. Schemas, modelling, integrations... It’s a lot. That’s why many businesses hold back.

But here’s the shift: you don’t need to build graphs yourself anymore.

Today, they’re offered as infrastructure: pre-built, self-evolving, and maintained by AI agents.

You simply connect your systems. No deep-graph expertise needed. The agent handles updates, structure, and growth in the background.

And the best part? As new data comes in, the graph keeps improving, which means your search, recommendations, chat, and analytics all get smarter automatically.

2. Building Graph-as-a-infrastructure

Most teams assume you need a graph expert to make all this work, but you don’t.

The complexity? It's abstracted away. The AI agent behind the scenes keeps the graph healthy: updating connections, adding new insights, and ensuring everything stays consistent.

You just use it. No need to model relationships manually or manage the graph yourself. It’s intelligence that takes care of itself and keeps getting better.

3. Impact on Data Products Across Domains

When you power your systems with the AI-driven graph infrastructure, you don’t just get more data; you get smarter outcomes across the board.

Your customer support gets sharper, resolving queries faster with context-aware answers. Fraud detection becomes proactive, spotting subtle patterns others miss. Product recommendations get more relevant: not just "popular," but personally meaningful. Your dashboards? They reveal insights that cut across silos instead of slices of isolated data.

Because it’s not just about more data, it’s about the right structure, continuously enriched by an agent that’s always learning.


Bottom Line: Graphs Work Smarter and Harder So You Don’t Have to

With AI-powered graph infrastructure, you’re not managing complexity but unlocking intelligence. No manual updates. No retraining. Just a graph that learns, adapts, and delivers better results every time your data changes.

Smarter apps. Faster insights. Reduced overhead.

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